The Digital Research Alliance of Canada (formerly Compute Canada) manages national HPC clusters running customized Slurm workload manager configurations and contributes open-source tooling for scientific computing. Their open-source stack powers university research across the country.

CANARIE manages the Canadian Access Federation (CAF), which provides open-source Shibboleth identity federation infrastructure enabling single sign-on for over 300 Canadian universities, colleges, and research institutions. Their open tools and configuration guides are publicly available.

SageMath is a free open-source mathematics software system. The Pacific Institute for the Mathematical Sciences (PIMS), a consortium of Canadian universities, provides infrastructure and hosting for SageMath and has been a key institutional backer of open mathematical software in Canada.

QGIS is the leading free and open-source desktop GIS application. Canadian government agencies, universities, and environmental organizations are among the world's largest QGIS user communities. Natural Resources Canada, Parks Canada, and multiple provincial mapping agencies have contributed data, plugins, and development.